| Protein ZmSRS7 | |
|---|---|
|
ZmSRS7 is a protein in the SHI/STY (SRS) family.
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| Information | |
| TF Name: | ZmSRS7 |
| Species: | Maize |
| TF Family: | SHI/STY (SRS) |
| Gene Name(Synonym): | SRS7 |
| Uniprot ID: | B4F8H3 |
Protein ZmSRS7
ZmSRS7 is a protein in the SHI/STY (SRS) family.
| Overview of domains present in v5 transcripts | |
|---|---|
| PF05142 | |
| Zm00001eb319530_T001 |  |
Protein-DNA Interactions
Meme Logos for Maize v4 Gene IDs
| Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
|---|---|---|---|---|---|
| Zm00001d021285 | DAPseq |  |
sequence | fimo | position |
| Zm00001d021285 | DAPseq |  |
sequence | fimo | position |
| Zm00001d021285 | ChIPseq |  |
sequence | fimo | position |
| Zm00001d021285 | PChIPseq |  |
sequence | fimo | position |
Interactions where ZmSRS7 is the regulator
Interactions where ZmSRS7 is the target
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Zm00001eb319530_T001 from maize genome v5
Amino Acid Sequence
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MAGFPLGGGGHSRDAPASSVPPVHPSDAASFLYAARAGAGLQLWQQHEQQQQHPFYTSNIIRFSDDPTGAPPSLTGAASS
SSSRGTRGGAGSGGGGGGGVSCQDCGNQAKKDCVHQRCRTCCKSRGFTCSTHVKSTWVPAAKRRERQQQLAVLAASAAAT
TAGAGPSRDPTKRPRARLSVATPATSSGDQQMVTVAERFPREVSSEAVFRCVRLGPVDQAEAEVAYQTTVSIGGHVFKGI
LHDVGPHSLPAAGVGGGAIEYHFRHAGDGLPPSTAATGEAGGGGVGSVVVSSAVVMDPYPTPGPYAAFPAGAPFFHGHPR
Q
MAGFPLGGGGHSRDAPASSVPPVHPSDAASFLYAARAGAGLQLWQQHEQQQQHPFYTSNIIRFSDDPTGAPPSLTGAASS
SSSRGTRGGAGSGGGGGGGVSCQDCGNQAKKDCVHQRCRTCCKSRGFTCSTHVKSTWVPAAKRRERQQQLAVLAASAAAT
TAGAGPSRDPTKRPRARLSVATPATSSGDQQMVTVAERFPREVSSEAVFRCVRLGPVDQAEAEVAYQTTVSIGGHVFKGI
LHDVGPHSLPAAGVGGGAIEYHFRHAGDGLPPSTAATGEAGGGGVGSVVVSSAVVMDPYPTPGPYAAFPAGAPFFHGHPR
Q
MAGFPLGGGGHSRDAPASSVPPVHPSDAASFLYAARAGAGLQLWQQHEQQQQHPFYTSNIIRFSDDPTGAPPSLTGAASS
SSSRGTRGGAGSGGGGGGGVSCQDCGNQAKKDCVHQRCRTCCKSRGFTCSTHVKSTWVPAAKRRERQQQLAVLAASAAAT
TAGAGPSRDPTKRPRARLSVATPATSSGDQQMVTVAERFPREVSSEAVFRCVRLGPVDQAEAEVAYQTTVSIGGHVFKGI
LHDVGPHSLPAAGVGGGAIEYHFRHAGDGLPPSTAATGEAGGGGVGSVVVSSAVVMDPYPTPGPYAAFPAGAPFFHGHPR
Q
MAGFPLGGGGHSRDAPASSVPPVHPSDAASFLYAARAGAGLQLWQQHEQQQQHPFYTSNIIRFSDDPTGAPPSLTGAASS
SSSRGTRGGAGSGGGGGGGVSCQDCGNQAKKDCVHQRCRTCCKSRGFTCSTHVKSTWVPAAKRRERQQQLAVLAASAAAT
TAGAGPSRDPTKRPRARLSVATPATSSGDQQMVTVAERFPREVSSEAVFRCVRLGPVDQAEAEVAYQTTVSIGGHVFKGI
LHDVGPHSLPAAGVGGGAIEYHFRHAGDGLPPSTAATGEAGGGGVGSVVVSSAVVMDPYPTPGPYAAFPAGAPFFHGHPR
Q
MAGFPLGGGGHSRDAPASSVPPVHPSDAASFLYAARAGAGLQLWQQHEQQQQHPFYTSNIIRFSDDPTGAPPSLTGAASS
SSSRGTRGGAGSGGGGGGGVSCQDCGNQAKKDCVHQRCRTCCKSRGFTCSTHVKSTWVPAAKRRERQQQLAVLAASAAAT
TAGAGPSRDPTKRPRARLSVATPATSSGDQQMVTVAERFPREVSSEAVFRCVRLGPVDQAEAEVAYQTTVSIGGHVFKGI
LHDVGPHSLPAAGVGGGAIEYHFRHAGDGLPPSTAATGEAGGGGVGSVVVSSAVVMDPYPTPGPYAAFPAGAPFFHGHPR
Q
| Secondary Structure Color Code | |
|---|---|
| BEND | region with high backbone curvature without specific hydrogen bonding |
| HELX_LH_PP_P | left-handed polyproline helix |
| HELX_RH_3T_P | right-handed 3-10 helix |
| HELX_RH_AL_P | right-handed alpha helix |
| HELX_RH_PI_P | right-handed pi helix |
| STRN | beta strand |
| TURN_TY1_P | type I turn |
| UNDETERMINED | no data available |
| Domains Present | |
|---|---|
| PF05142 |
|
| Hover here to show all domains | |
Nucleotide Sequence
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GGCCGCGCTGCCGTGTTGGTGTGGT...
GGCCGCGCTGCCGTGTTGGTGTGGTGCCTGTCTCGCGCTGTGCGGAAAGGAGATAGAGAGAGAGGGAGTGAGAAGAAGGAGACGCGAGGAGAGAGAGAGAGCGGCAGGCAGGCAGGCAGGCAATAAATGGCAGTTTTGGTGCGCGCAGGCTGATGGCGGCGTGGCAGGTCCTCTCTGTCGCCTCACCGTCTTAACTCCGGCCGCGCGCCGGCACCACAAACCACACCGCTCGGCTGCGAGCACGCGGGTTTTAATCCGTCGCAGAGCGCATGAGCACGCCGCCCAGAGCGCAGACTACGACGAGCAGCCGTCTGTAGAGGGGGAGGGACCGAGGGAGAGATCAGGGCGTCAGGCCGTTGTCTCTCAGCTTCACCTTCACCTTGCCGGGCACGGCGAACGGCACGGCGGCCTATGGATTTGGCCACATGGCGGGGTTCCCTCTAGGTGGAGGAGGCCACAGCCGCGACGCCCCCGCGTCGTCCGTCCCGCCGGTGCACCCCTCCGACGCAGCGTCCTTCCTCTACGCCGCGCGCGCGGGAGCGGGCCTGCAGCTATGGCAGCAGCACGAGCAGCAACAGCAGCACCCGTTCTACACCTCCAACATCATCCGCTTCTCCGATGACCCGACCGGCGCCCCGCCCTCGCTCACGGGCGCCGCGTCGTCGTCGTCTTCGCGCGGCACGAGGGGCGGCGCGGGAAGCGGCGGCGGAGGCGGCGGCGGGGTCAGCTGCCAGGACTGCGGCAACCAGGCCAAGAAGGACTGCGTGCACCAGCGCTGCCGCACCTGCTGCAAGAGCCGCGGCTTCACCTGCAGCACCCACGTCAAGTCCACCTGGGTCCCTGCCGCCAAGAGACGCGAGCGCCAGCAGCAGCTCGCCGTGCTAGCGGCCTCCGCCGCCGCCACAACCGCCGGCGCCGGCCCATCCCGCGACCCGACCAAGCGCCCTCGCGCGCGCCTCTCCGTCGCCACCCCCGCCACGTCCTCGGGGGATCAGCAGATGGTCACGGTCGCGGAGAGGTTCCCACGGGAGGTGAGCTCGGAGGCGGTGTTCCGGTGCGTGCGCCTGGGGCCGGTCGACCAGGCCGAGGCGGAGGTCGCGTACCAGACCACCGTCAGCATCGGCGGCCACGTGTTCAAGGGCATCCTTCACGACGTTGGCCCTCACAGCTTGCCTGCCGCTGGAGTCGGAGGCGGCGCCATCGAGTACCACTTCCGCCACGCCGGGGACGGATTGCCGCCGAGCACGGCAGCCACTGGCGAAGCAGGCGGCGGTGGCGTGGGGAGTGTCGTCGTGTCATCGGCTGTGGTGATGGACCCGTACCCGACGCCCGGACCCTACGCCGCCTTCCCCGCCGGCGCGCCGTTCTTCCACGGCCACCCGAGACAGTGACCGCCGGCTCGCTCGCTCGCCAGCAGCCGTCCCGCTGTGTAACGACATCACGACTCCCATCTCTGGCTCGCTCGATCTGTCAATTTCGTTAGCTTCCTAATTTCTTAGCCTCTTGTTGAGATGCATAAATTCATGTTCCTTCTAGAGCCTAGCTAGCTAGCTTAGGCGCGGGTTAGACTTGTTTGCTTCTTGAGATCAATTCATGAGGTGAGTAGCAATATACTCAGTGGCTGCAAGTGGCTAAAAATCTGACATTTAGGAACCTTGATGAGACATTTGAGATGGTTTCTTGCACTGTTCTCTCTCTGATGGTTTTTGGTAATTCTTGTTGGTGTGGTTTTGCTC
GRMZM2G135783_T01 from maize genome v3
Amino Acid Sequence
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MAGFPLGGGGHSRDAPASSVPPVHPSDAASFLYAARAGAGLQLWQQHEQQQQHPFYTSNIIRFSDDPTGAPPSLTGAASS
SSSRGTRGGAGSGGGGGGGVSCQDCGNQAKKDCVHQRCRTCCKSRGFTCSTHVKSTWVPAAKRRERQQQLAVLAASAAAT
TAGAGPSRDPTKRPRARLSVATPATSSDGHGRGEVPTGGELGGGVPVRAPGAGRPGRGGGRVPDHRQHRRPRVQGHPSRR
WPSQLACRWSRRRRHRVPLPPRRGRIAAEHGSHWRSRRRWRGECRRVIGCGDGPVPDARTLRRLPRRRAVLPRPPETVTA
GSLARQQPSRCVTTSRLPSLARSICQFR
Nucleotide Sequence
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GGCCGCGCTGCCGTGTTGGTGTGGT...
GGCCGCGCTGCCGTGTTGGTGTGGTGCCTGTCTCGCGCTGTGCGGAAAGGAGATAGAGAGAGAGGGAGTGAGAAGAAGGAGACGCGAGGAGAGAGAGAGAGCGGCAGGCAGGCAGGCAGGCAATAAATGGCAGTTTTGGTGCGCGCAGGCTGATGGCGGCGTGGCAGGTCCTCTCTGTCGCCTCACCGTCTTAACTCCGGCCGCGCGCCGGCACCACAAACCACACCGCTCGGCTGCGAGCACGCGGGTTTTAATCCGTCGCAGAGCGCATGAGCACGCCGCCCAGAGCGCAGACTACGACGAGCAGCCGTCTGTAGAGGGGGAGGGACCGAGGGAGAGATCAGGGCGTCAGGCCGTTGTCTCTCAGCTTCACCTTCACCTTGCCGGGCACGGCGAACGGCACGGCGGCCTATGGATTTGGCCACATGGCGGGGTTCCCTCTAGGTGGAGGAGGCCACAGCCGCGACGCCCCCGCGTCGTCCGTCCCGCCGGTGCACCCCTCCGACGCAGCGTCCTTCCTCTACGCCGCGCGCGCGGGAGCGGGCCTGCAGCTATGGCAGCAGCACGAGCAGCAACAGCAGCACCCGTTCTACACCTCCAACATCATCCGCTTCTCCGATGACCCGACCGGCGCCCCGCCCTCGCTCACGGGCGCCGCGTCGTCGTCGTCTTCGCGCGGCACGAGGGGCGGCGCGGGAAGCGGCGGCGGAGGCGGCGGCGGGGTCAGCTGCCAGGACTGCGGCAACCAGGCCAAGAAGGACTGCGTGCACCAGCGCTGCCGCACCTGCTGCAAGAGCCGCGGCTTCACCTGCAGCACCCACGTCAAGTCCACCTGGGTCCCTGCCGCCAAGAGACGCGAGCGCCAGCAGCAGCTCGCCGTGCTAGCGGCCTCCGCCGCCGCCACAACCGCCGGCGCCGGCCCATCCCGCGACCCGACCAAGCGCCCTCGCGCGCGCCTCTCCGTCGCCACCCCCGCCACGTCCTCGGATGGTCACGGTCGCGGAGAGGTTCCCACGGGAGGTGAGCTCGGAGGCGGTGTTCCGGTGCGTGCGCCTGGGGCCGGTCGACCAGGCCGAGGCGGAGGTCGCGTACCAGACCACCGTCAGCATCGGCGGCCACGTGTTCAAGGGCATCCTTCACGACGTTGGCCCTCACAGCTTGCCTGCCGCTGGAGTCGGAGGCGGCGCCATCGAGTACCACTTCCGCCACGCCGGGGACGGATTGCCGCCGAGCACGGCAGCCACTGGCGAAGCAGGCGGCGGTGGCGTGGGGAGTGTCGTCGTGTCATCGGCTGTGGTGATGGACCCGTACCCGACGCCCGGACCCTACGCCGCCTTCCCCGCCGGCGCGCCGTTCTTCCACGGCCACCCGAGACAGTGACCGCCGGCTCGCTCGCTCGCCAGCAGCCGTCCCGCTGTGTAACGACATCACGACTCCCATCTCTGGCTCGCTCGATCTGTCAATTTCGTTAGCTTCCTAATTTCTTAGCCTCTTGTTGAGATGCATAAATTCATGTTCCTTCTAGAGCCTAGCTAGCTAGCTTAGGCGCGGGTTAGACTTGTTTGCTTCTTGAGATCAATTCATGAGGTGAGTAGCAATATACTCAGTGGCTGCAAGTGGCTAAAAATCTGACATTTAGGAACCTTGATGAGACATTTGAGATGGTTTCTTGCACTGTTCTCTCTCTGATGGTTTTTGGTAATTCTTGTTGGTGTGGTTTTGCTC
GRMZM2G135783_T02 from maize genome v3
Amino Acid Sequence
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MAGFPLGGGGHSRDAPASSVPPVHPSDAASFLYAARAGAGLQLWQQHEQQQQHPFYTSNIIRFSDDPTGAPPSLTGAASS
SSSRGTRGGAGSGGGGGGGVSCQDCGNQAKKDCVHQRCRTCCKSRGFTCSTHVKSTWVPAAKRRERQQQLAVLAASAAAT
TAGAGPSRDPTKRPRARLSVATPATSSGDQQMVTVAERFPREVSSEAVFRCVRLGPVDQAEAEVAYQTTVSIGGHVFKGI
LHDVGPHSLPAAGVGGGAIEYHFRHAGDGLPPSTAATGEAGGGGVGSVVVSSAVVMDPYPTPGPYAAFPAGAPFFHGHPR
Q
Nucleotide Sequence
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AAAGGAGATAGAGAGAGAGGGAGTG...
AAAGGAGATAGAGAGAGAGGGAGTGAGAAGAAGGAGACGCGAGGAGAGAGAGAGAGCGGCAGGCAGGCAGGCAGGCAATAAATGGCAGTTTTGGTGCGCGCAGGCTGATGGCGGCGTGGCAGGTCCTCTCTGTCGCCTCACCGTCTTAACTCCGGCCGCGCGCCGGCACCACAAACCACACCGCTCGGCTGCGAGCACGCGGGTTTTAATCCGTCGCAGAGCGCATGAGCACGCCGCCCAGAGCGCAGACTACGACGAGCAGCCGTCTGTAGAGGGGGAGGGACCGAGGGAGAGATCAGGGCGTCAGGCCGTTGTCTCTCAGCTTCACCTTCACCTTGCCGGGCACGGCGAACGGCACGGCGGCCTATGGATTTGGCCACATGGCGGGGTTCCCTCTAGGTGGAGGAGGCCACAGCCGCGACGCCCCCGCGTCGTCCGTCCCGCCGGTGCACCCCTCCGACGCAGCGTCCTTCCTCTACGCCGCGCGCGCGGGAGCGGGCCTGCAGCTATGGCAGCAGCACGAGCAGCAACAGCAGCACCCGTTCTACACCTCCAACATCATCCGCTTCTCCGATGACCCGACCGGCGCCCCGCCCTCGCTCACGGGCGCCGCGTCGTCGTCGTCTTCGCGCGGCACGAGGGGCGGCGCGGGAAGCGGCGGCGGAGGCGGCGGCGGGGTCAGCTGCCAGGACTGCGGCAACCAGGCCAAGAAGGACTGCGTGCACCAGCGCTGCCGCACCTGCTGCAAGAGCCGCGGCTTCACCTGCAGCACCCACGTCAAGTCCACCTGGGTCCCTGCCGCCAAGAGACGCGAGCGCCAGCAGCAGCTCGCCGTGCTAGCGGCCTCCGCCGCCGCCACAACCGCCGGCGCCGGCCCATCCCGCGACCCGACCAAGCGCCCTCGCGCGCGCCTCTCCGTCGCCACCCCCGCCACGTCCTCGGGGGATCAGCAGATGGTCACGGTCGCGGAGAGGTTCCCACGGGAGGTGAGCTCGGAGGCGGTGTTCCGGTGCGTGCGCCTGGGGCCGGTCGACCAGGCCGAGGCGGAGGTCGCGTACCAGACCACCGTCAGCATCGGCGGCCACGTGTTCAAGGGCATCCTTCACGACGTTGGCCCTCACAGCTTGCCTGCCGCTGGAGTCGGAGGCGGCGCCATCGAGTACCACTTCCGCCACGCCGGGGACGGATTGCCGCCGAGCACGGCAGCCACTGGCGAAGCAGGCGGCGGTGGCGTGGGGAGTGTCGTCGTGTCATCGGCTGTGGTGATGGACCCGTACCCGACGCCCGGACCCTACGCCGCCTTCCCCGCCGGCGCGCCGTTCTTCCACGGCCACCCGAGACAGTGACCGCCGGCTCGCTCGCTCGCCAGCAGCCGTCCCGCTGTGTAACGACATCACGACTCCCATCTCTGGCTCGCTCGATCTGTCAATTTCGTTAGCTTCCTAATTTCTTAGCCTCTTGTTGAGATGCATAAATTCATGTTCCTTCTAGAGCCTAGCTAGCTAGCTTAGGCGCGGGTTAGACTTGTTTGCTTCTTGAGATCAATTCATGAGGTGAGTAGCAATATACTCAGTGGCTGCAAGTGGCTAAAAATCTGACATTTAGGAACCTTGATGAGACATTTGAGATGGTTTCTTGCACTGTTCTCTCTCTGATGGTTTTTGGTAATTCTTGTTGGTGTGGTTTTGCTC
Zm00001d021285_T001 from maize genome v4
Amino Acid Sequence
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MAGFPLGGGGHSRDAPASSVPPVHPSDAASFLYAARAGAGLQLWQQHEQQQQHPFYTSNIIRFSDDPTGAPPSLTGAASS
SSSRGTRGGAGSGGGGGGGVSCQDCGNQAKKDCVHQRCRTCCKSRGFTCSTHVKSTWVPAAKRRERQQQLAVLAASAAAT
TAGAGPSRDPTKRPRARLSVATPATSSGDQQMVTVAERFPREVSSEAVFRCVRLGPVDQAEAEVAYQTTVSIGGHVFKGI
LHDVGPHSLPAAGVGGGAIEYHFRHAGDGLPPSTAATGEAGGGGVGSVVVSSAVVMDPYPTPGPYAAFPAGAPFFHGHPR
Q
Nucleotide Sequence
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AAGGAGATAGAGAGAGAGGGAGTGA...
AAGGAGATAGAGAGAGAGGGAGTGAGAAGAAGGAGACGCGAGGAGAGAGAGAGAGCGGCAGGCAGGCAGGCAGGCAATAAATGGCAGTTTTGGTGCGCGCAGGCTGATGGCGGCGTGGCAGGTCCTCTCTGTCGCCTCACCGTCTTAACTCCGGCCGCGCGCCGGCACCACAAACCACACCGCTCGGCTGCGAGCACGCGGGTTTTAATCCGTCGCAGAGCGCATGAGCACGCCGCCCAGAGCGCAGACTACGACGAGCAGCCGTCTGTAGAGGGGGAGGGACCGAGGGAGAGATCAGGGCGTCAGGCCGTTGTCTCTCAGCTTCACCTTCACCTTGCCGGGCACGGCGAACGGCACGGCGGCCTATGGATTTGGCCACATGGCGGGGTTCCCTCTAGGTGGAGGAGGCCACAGCCGCGACGCCCCCGCGTCGTCCGTCCCGCCGGTGCACCCCTCCGACGCAGCGTCCTTCCTCTACGCCGCGCGCGCGGGAGCGGGCCTGCAGCTATGGCAGCAGCACGAGCAGCAACAGCAGCACCCGTTCTACACCTCCAACATCATCCGCTTCTCCGATGACCCGACCGGCGCCCCGCCCTCGCTCACGGGCGCCGCGTCGTCGTCGTCTTCGCGCGGCACGAGGGGCGGCGCGGGAAGCGGCGGCGGAGGCGGCGGCGGGGTCAGCTGCCAGGACTGCGGCAACCAGGCCAAGAAGGACTGCGTGCACCAGCGCTGCCGCACCTGCTGCAAGAGCCGCGGCTTCACCTGCAGCACCCACGTCAAGTCCACCTGGGTCCCTGCCGCCAAGAGACGCGAGCGCCAGCAGCAGCTCGCCGTGCTAGCGGCCTCCGCCGCCGCCACAACCGCCGGCGCCGGCCCATCCCGCGACCCGACCAAGCGCCCTCGCGCGCGCCTCTCCGTCGCCACCCCCGCCACGTCCTCGGGGGATCAGCAGATGGTCACGGTCGCGGAGAGGTTCCCACGGGAGGTGAGCTCGGAGGCGGTGTTCCGGTGCGTGCGCCTGGGGCCGGTCGACCAGGCCGAGGCGGAGGTCGCGTACCAGACCACCGTCAGCATCGGCGGCCACGTGTTCAAGGGCATCCTTCACGACGTTGGCCCTCACAGCTTGCCTGCCGCTGGAGTCGGAGGCGGCGCCATCGAGTACCACTTCCGCCACGCCGGGGACGGATTGCCGCCGAGCACGGCAGCCACTGGCGAAGCAGGCGGCGGTGGCGTGGGGAGTGTCGTCGTGTCATCGGCTGTGGTGATGGACCCGTACCCGACGCCCGGACCCTACGCCGCCTTCCCCGCCGGCGCGCCGTTCTTCCACGGCCACCCGAGACAGTGACCGCCGGCTCGCTCGCTCGCCAGCAGCCGTCCCGCTGTGTAACGACATCACGACTCCCATCTCTGGCTCGCTCGATCTGTCAATTTCGTTAGCTTCCTAATTTCTTAGCCTCTTGTTGAGATGCATAAATTCATGTTCCTTCTAGAGCCTAGCTAGCTAGCTTAGGCGCGGGTTAGACTTGTTTGCTTCTTGAGATCAATTCATGAGGTGAGTAGCAATATACTCAGTGGCTGCAAGTGGCTAAAAATCTGACATTTAGGAACCTTGATGAGACATTTGAGATGGTTTCTTGC
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